User Groups
The Pediatric Cancer Data Core supports and receives input from various user
groups across a range of disciplines and regions.
experimental therapeutics and precision medicine
The proposed PCDC will support all the components in the CMCD/UTSW ET/PM programs.
Examples of major use cases in ET and PM programs.
| Investigator | ET/PT Programs | Cohort Discovery | Data and Sample Access & Analysis | |||
|---|---|---|---|---|---|---|
| Clinical | Sample | Image | Genomic | |||
| Kless | Susceptibility | Yes | Yes | Yes | Yes | |
| Brugarolas | Immuno, Xenografts | Yes | Yes | Yes | Yes | |
| Tomlinson | Susceptibility | Yes | Yes | |||
| Laetsch | Clinical Trials | Yes | Yes | Yes | ||
| DeBerardinis | Metabolism | Yes | Yes | Yes | ||
| Skapek | Sequencing, Xenografts | Yes | Yes | Yes | Yes | |
| Koh | Microbiomics | Yes | Yes | Yes | ||
| Li | Immuno | Yes | Yes | Yes | ||
| Amatruda | Sequencing | Yes | Yes | Yes | Yes | Yes |
| Mendell | Discovery | Yes | Yes | Yes | ||
| Zhu | Discovery | Yes | Yes | Yes | Yes | |
Contributors/Users
Laura Klesse, M.D., Ph.D.
Department of Pediatrics, UTSW
Department of Pediatrics, UTSW
Kathleen Lugwig, M.D.
Department of Pediatrics, UTSW
Department of Pediatrics, UTSW
James Brugarolas, M.D., Ph.D.
Department of Internal Medicine
Director of the Kidney Cancer Program, UTSW
Department of Internal Medicine
Director of the Kidney Cancer Program, UTSW
Gail E Tomlinson, M.D., Ph.D.
Children’s Cancer Research Institute
UT Health Science Center at San Antonio
Children’s Cancer Research Institute
UT Health Science Center at San Antonio
Ralph J. DeBerardinis, M.D., Ph.D.
Children's Medical Center Research Institute, UTSW
Children's Medical Center Research Institute, UTSW
Stephen X. Skapek, M.D.
Chief of the Division of Hematology‐Oncology
Prof. Dept. of Pediatrics, UTSW
Chief of the Division of Hematology‐Oncology
Prof. Dept. of Pediatrics, UTSW
Joshua Mendell, M.D., Ph.D.
Department of Molecular Biology, UTSW
Department of Molecular Biology, UTSW
Andrew Y. Koh, M.D.
Departments of Pediatrics and Microbiology,
UTSW and CMCD
Departments of Pediatrics and Microbiology,
UTSW and CMCD
Hao Zhu, M.D.
Children's Medical Center Research Institute, UTSW
Children's Medical Center Research Institute, UTSW
James Amatruda, M.D., Ph.D.
Children’s Hospital Los Angeles,
Keck School of Medicine of the University of Southern California
Children’s Hospital Los Angeles,
Keck School of Medicine of the University of Southern California
Bo Li, Ph.D.
Departments of Bioinformatics and Immunology, UTSW
Departments of Bioinformatics and Immunology, UTSW
clinical Trials
Available clinical trials at UT Southwestern.
population research and cancer survivorship research
Big data and technology are starting to change the methods of population
research in prevention, epidemiology, and improving quality of care in cancer survivors.
Contributors/Users
Simon J. Craddock Lee, Ph.D., M.P.H.
Department of Clinical Sciences, UTSW
Department of Clinical Sciences, UTSW
Philip J. Lupo, Ph.D.
Department of Pediatrics,
Baylor College of Medicine / Texas Children’s Hospital
Department of Pediatrics,
Baylor College of Medicine / Texas Children’s Hospital
Alice A. Holland, Ph.D., A.B.P.P.
Department of Psychiatry, UTSW
Department of Psychiatry, UTSW
Madhukar H. Trivedi, M.D.
Department of Psychiatry, UTSW
Department of Psychiatry, UTSW
computational research
Tools for data collection and data storage
Examples of computational research.
| PI | Institution | Research Area |
|---|---|---|
| Junzhou Huang | UT Arlington | CS, Image analysis |
| Ovidiu Daescu | UT Dallas | CS, Machine learning |
| Jim Ji | Texas A&M | EE, Image analysis |
| Daehwan Kim | UTSW | CS, Genomic analysis |
| Marina Vannucci | Rice | Stat, Data integration |
Contributors/Users
Junzhou Huang, Ph.D.
Department of Computer Science and Engineering,
UT Arlington
Department of Computer Science and Engineering,
UT Arlington
Ovidiu Daescu, Ph.D.
Associate Department Head of Computer Science,
UT Dallas
Associate Department Head of Computer Science,
UT Dallas
Jim Ji, Ph.D.
Department of Electrical and Computer Engineering,
Texas A & M University
Department of Electrical and Computer Engineering,
Texas A & M University
Daehwan Kim, Ph.D.
Department of Boinformatics,
UTSW
Department of Boinformatics,
UTSW
Marina Vannucci, Ph.D.
Noah Harding Professor and Chair of Statistics,
Department of Statistics,
Rice University
Noah Harding Professor and Chair of Statistics,
Department of Statistics,
Rice University