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  2. Lee, S., Liang, F., Cai, L., Xiao, G.* (2017) A two-stage approach of gene network analysis for high-dimensional heterogeneous data, Biostatistics (In Press)

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  1. Wang, T., Xiao, G., Chu, Y., Zhang, M.Q., Corey, D.R., Xie, Y.* (2015) Design and bioinformatics analysis of genome-wide CLIP experiments, Nucleic Acids Research 43(11):5263-74. PMID: 25958398

  2. Yang, J., Tang, H., Li, Y., Zhong, R., Wang, T., Wong, S., Xiao, G., and Xie, Y.* (2015) DIGRE: Drug Induced Genomic Residual Effect Model for Successful Prediction of Multidrug Effects, CPT: Pharmacometrics & Systems Pharmacology DOI: 10.1002/psp4.1.

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  6. Tang, H., Sebti, S., Titone, R., Zhou, Y., Isidoro, C., Ross, T., Hibshoosh, H., Xiao, G., Packer, M., Xie, Y.*, and Levine, B.* (2015) Decreased BECN1 mRNA Expression in Human Breast Cancer is Associated with Estrogen Receptor-Negative Subtypes and Poor Prognosis, EBioMedicine 2, 255-263.

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  8. Zang, X., Chen, M., Zhou, Y., Xiao, G., Xie, Y.*, and Wang, X.* (2015) Meta-analysis Identification of CDKN3 Gene Expression as a Prognostic Biomarker in Lung Adenocarcinoma, Cancer Informatics (In Press)

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  1. Wang, T., Xie, Y., and Xiao, G.* (2014) dCLIP: a computational approach for comparative CLIP-seq analyses, Genome biology 15, R11.

  2. Xiao, G., Ma, S., Minna, J., and Xie, Y.* (2014) Adaptive prediction model in prospective molecular signature-based clinical studies, Clin Cancer Res 20, 531-539.

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  5. Zhong, R., Kim, J., Kim, H. S., Kim, M., Lum, L., Levine, B., Xiao, G., White, M. A., and Xie, Y.* (2014) Computational detection and suppression of sequence-specific off-target phenotypes from whole genome RNAi screens, Nucleic acids research 42, 8214-8222.

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  7. Kwon, I., Xiang, S., Kato, M., Wu, L., Theodoropoulos, P., Wang, T., Kim, J., Yun, J., Xie, Y., and McKnight, S. L. (2014) Poly-dipeptides encoded by the C9ORF72 repeats bind nucleoli, impede RNA biogenesis, and kill cells, Science.

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  2. Yang, J., Wang, X., Kim, M., Xie, Y., and Xiao, G.* (2013) Detection of candidate tumor driver genes using a fully integrated Bayesian approach, Statistics in medicine 33, 1784-1800.

  3. Wei, Y., Zou, Z., Becker, N., Anderson, M., Sumpter, R., Xiao, G., Kinch, L., Koduru, P., Christudass, C. S., Veltri, R. W., Grishin, N. V., Peyton, M., Minna, J., Bhagat, G., and Levine, B. (2013) EGFR-mediated Beclin 1 phosphorylation in autophagy suppression, tumor progression, and tumor chemoresistance, Cell 154, 1269-1284.

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